Class BCF2FieldWriter.SiteWriter
- java.lang.Object
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- htsjdk.variant.variantcontext.writer.BCF2FieldWriter
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- htsjdk.variant.variantcontext.writer.BCF2FieldWriter.SiteWriter
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- Direct Known Subclasses:
BCF2FieldWriter.GenericSiteWriter
- Enclosing class:
- BCF2FieldWriter
public abstract static class BCF2FieldWriter.SiteWriter extends BCF2FieldWriter
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Nested Class Summary
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Nested classes/interfaces inherited from class htsjdk.variant.variantcontext.writer.BCF2FieldWriter
BCF2FieldWriter.FTGenotypesWriter, BCF2FieldWriter.GenericSiteWriter, BCF2FieldWriter.GenotypesWriter, BCF2FieldWriter.GTWriter, BCF2FieldWriter.IGFGenotypesWriter, BCF2FieldWriter.IntegerTypeGenotypesWriter, BCF2FieldWriter.SiteWriter, BCF2FieldWriter.StaticallyTypeGenotypesWriter
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Constructor Summary
Constructors Modifier Constructor Description protected
SiteWriter(VCFHeader header, BCF2FieldEncoder fieldEncoder)
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description abstract void
site(BCF2Encoder encoder, VariantContext vc)
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Methods inherited from class htsjdk.variant.variantcontext.writer.BCF2FieldWriter
done, getField, getFieldEncoder, getHeader, start, toString
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Constructor Detail
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SiteWriter
protected SiteWriter(VCFHeader header, BCF2FieldEncoder fieldEncoder)
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Method Detail
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site
public abstract void site(BCF2Encoder encoder, VariantContext vc) throws IOException
- Throws:
IOException
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