Constant Field Values

Contents

htsjdk.samtools.*

  • htsjdk.samtools.cram.encoding.readfeatures.BaseQualityScore 
    Modifier and Type Constant Field Value
    public static final byte operator 81
  • htsjdk.samtools.cram.encoding.readfeatures.Bases 
    Modifier and Type Constant Field Value
    public static final byte operator 98
  • htsjdk.samtools.cram.encoding.readfeatures.Deletion 
    Modifier and Type Constant Field Value
    public static final byte operator 68
  • htsjdk.samtools.cram.encoding.readfeatures.HardClip 
    Modifier and Type Constant Field Value
    public static final byte operator 72
  • htsjdk.samtools.cram.encoding.readfeatures.InsertBase 
    Modifier and Type Constant Field Value
    public static final byte operator 105
  • htsjdk.samtools.cram.encoding.readfeatures.Insertion 
    Modifier and Type Constant Field Value
    public static final byte operator 73
  • htsjdk.samtools.cram.encoding.readfeatures.Padding 
    Modifier and Type Constant Field Value
    public static final byte operator 80
  • htsjdk.samtools.cram.encoding.readfeatures.ReadBase 
    Modifier and Type Constant Field Value
    public static final byte operator 66
  • htsjdk.samtools.cram.encoding.readfeatures.RefSkip 
    Modifier and Type Constant Field Value
    public static final byte operator 78
  • htsjdk.samtools.cram.encoding.readfeatures.Scores 
    Modifier and Type Constant Field Value
    public static final byte operator 113
  • htsjdk.samtools.cram.encoding.readfeatures.SoftClip 
    Modifier and Type Constant Field Value
    public static final byte operator 83
  • htsjdk.samtools.cram.encoding.readfeatures.Substitution 
    Modifier and Type Constant Field Value
    public static final int NO_CODE -1
    public static final byte operator 88
  • htsjdk.samtools.cram.io.ITF8 
    Modifier and Type Constant Field Value
    public static final int MAX_BYTES 5
  • htsjdk.samtools.cram.structure.block.Block 
    Modifier and Type Constant Field Value
    public static final int NO_CONTENT_ID 0

htsjdk.tribble.*

htsjdk.variant.*